Co-expression analysis

Gene ID Ta.26662.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g14160: transport protein, putative (HF=3e-17)
Module size 6 genes
NF 0.02
%ile 7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.71Ta.26662.1.A1_atCD491499--3e-17At4g14160transport protein, putativeO.I.H.G.S.X.
0.045.80.96Ta.9610.1.S1_x_atCD936037--5e-4At1g29040unknown proteinO.I.H.G.S.X.
0.034.70.96Ta.12665.1.S1_atCK196684--2e-76At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.023.60.97Ta.24987.1.S1_atCK166034Cytosolic malate dehydrogenase-1e-64At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.012.40.95TaAffx.98378.1.S1_atCA735372--7e-2At2g37035unknown proteinO.I.H.G.S.X.
0.012.40.91Ta.6707.1.A1_atBJ310002--1e+0At1g50390fructokinase-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.6GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1615265_at, orthologous to the query gene, Ta.26662.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8193.71615265_atAt4g14160hypothetical protein LOC100262252-2e-5At4g14160transport protein, putativeO.I.H.G.S.X.
0.5475.71620312_atAt4g14160hypothetical protein LOC100254135-7e-56At1g49040SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1)O.I.H.G.S.X.
0.4464.11615636_atAt4g14160hypothetical protein LOC100264871-5e+0At5g63150unknown proteinO.I.H.G.S.X.
0.4361.51616981_atAt4g14160phospholipase D alpha-4e-52At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.4158.71622462_atAt4g14160hypothetical protein LOC100265163-4e-23At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)O.I.H.G.S.X.
0.4158.71620700_atAt4g14160hypothetical protein LOC100261522-4e-20At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.3853.61616036_atAt4g14160hypothetical protein LOC100241363-7e-4At4g23630BTI1 (VIRB2-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3650.71614620_atAt4g14160hypothetical protein LOC100249044-5e-37At5g37310-O.I.H.G.S.X.
0.3650.71610845_atAt4g14160hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.
0.3650.7AFFX-Vvi-actin-3_c2_s_atAt4g14160actin 1-O.I.H.G.S.X.
0.3548.51606368_s_atAt4g14160actin 1-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.3548.51611412_atAt4g14160hypothetical protein LOC100244694-2e+0At5g37480unknown proteinO.I.H.G.S.X.
0.3446.8AFFX-Vvi-actin-3_s_atAt4g14160actin 1-O.I.H.G.S.X.
0.3446.8AFFX-Vvi-actin-3_c6_s_atAt4g14160actin 1-O.I.H.G.S.X.
0.3345.71619318_atAt4g14160hypothetical protein LOC100248394-5e+0At5g65840-O.I.H.G.S.X.
0.3345.71618063_atAt4g14160hypothetical protein LOC100259885-7e-6At4g16830nuclear RNA-binding protein (RGGA)O.I.H.G.S.X.
0.3243.11616644_atAt4g14160hypothetical protein LOC100250187-5e-34At2g29080ftsh3 (FtsH protease 3)O.I.H.G.S.X.
0.3141.31618759_atAt4g14160hypothetical protein LOC100256813-1e+0At1g76010nucleic acid bindingO.I.H.G.S.X.
0.3141.31610761_atAt4g14160hypothetical protein LOC100244127-6e-68At2g26300GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.3141.31621991_atAt4g14160hypothetical protein LOC100243393-1e-1At2g41060RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3039.41617329_atAt4g14160hypothetical protein LOC100255368-5e-49At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.2937.71615084_atAt4g14160hypothetical protein LOC100252857-8e-9At1g04170EIF2 GAMMAO.I.H.G.S.X.
0.2734.01612360_atAt4g14160hypothetical protein LOC100244110-2e-152At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.2327.51619414_atAt4g14160hypothetical protein LOC100241708-1e-8At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.2124.01619398_atAt4g14160hypothetical protein LOC100261913-4e-135At3g08550KOB1 (KOBITO)O.I.H.G.S.X.
0.1920.91607119_atAt4g14160hypothetical protein LOC100247980-6e-71At1g78920AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2)O.I.H.G.S.X.
0.1819.41615685_atAt4g14160hypothetical protein LOC100250471-1e+0At5g15230GASA4 (GAST1 PROTEIN HOMOLOG 4)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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