Co-expression analysis

Gene ID Ta.26662.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g14160: transport protein, putative (HF=3e-17)
Module size 6 genes
NF 0.02
%ile 7.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.71Ta.26662.1.A1_atCD491499--3e-17At4g14160transport protein, putativeO.I.H.G.S.X.
0.045.80.96Ta.9610.1.S1_x_atCD936037--5e-4At1g29040unknown proteinO.I.H.G.S.X.
0.034.70.96Ta.12665.1.S1_atCK196684--2e-76At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.023.60.97Ta.24987.1.S1_atCK166034Cytosolic malate dehydrogenase-1e-64At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.012.40.95TaAffx.98378.1.S1_atCA735372--7e-2At2g37035unknown proteinO.I.H.G.S.X.
0.012.40.91Ta.6707.1.A1_atBJ310002--1e+0At1g50390fructokinase-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.6GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig4761_at, orthologous to the query gene, Ta.26662.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6581.4Contig4761_atAt4g14160--2e-8At1g05520transport protein, putativeO.I.H.G.S.X.
0.6178.7HVSMEl0014B21r2_atAt4g14160--3e+0At4g20220-O.I.H.G.S.X.
0.6077.3Contig24078_atAt4g14160--4e+0At3g27080TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)O.I.H.G.S.X.
0.5167.5Contig956_x_atAt4g14160--2e-2At5g02380MT2B (METALLOTHIONEIN 2B)O.I.H.G.S.X.
0.5066.9Contig21846_atAt4g14160--3e-1At4g1810060S ribosomal protein L32 (RPL32A)O.I.H.G.S.X.
0.4963.7Contig17010_atAt4g14160--1e-7At2g27880AGO5 (ARGONAUTE 5)O.I.H.G.S.X.
0.4661.0Contig19407_atAt4g14160--5e-1At1g32580plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.4356.4Contig17181_atAt4g14160--6e-4At5g39590-O.I.H.G.S.X.
0.4255.2Contig15685_atAt4g14160--7e-1At1g23780F-box family proteinO.I.H.G.S.X.
0.4255.2Contig17091_atAt4g14160--6e+0At4g21745-O.I.H.G.S.X.
0.4255.2Contig7115_atAt4g14160--9e-1At5g51100FSD2 (FE SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.
0.4053.1Contig15774_atAt4g14160--3e-2At5g54200WD-40 repeat family proteinO.I.H.G.S.X.
0.4053.1Contig22888_atAt4g14160--1e+0At5g27944sequence-specific DNA binding / transcription factorO.I.H.G.S.X.
0.3747.9Contig7504_atAt4g14160--1e+0At1g52825unknown proteinO.I.H.G.S.X.
0.3647.1Contig10935_atAt4g14160--1e-2At5g41130acyltransferase/ catalyticO.I.H.G.S.X.
0.3342.6Contig8149_atAt4g14160--6e+0At4g14225zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.3342.6Contig5452_atAt4g14160--9e-22At2g47250RNA helicase, putativeO.I.H.G.S.X.
0.2835.5Contig24086_atAt4g14160--2e+0At3g27950early nodule-specific protein, putativeO.I.H.G.S.X.
0.2835.5Contig6089_atAt4g14160--2e-23At3g15610transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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