Co-expression analysis

Gene ID	Ta.26661.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g19760: dicarboxylate/tricarboxylate carrier (DTC) (HF=4e-10)
Module size	8 genes
NF	0.75
%ile	95.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.95	Ta.26661.1.A1_at	CD491498	-	-	4e-10	At5g19760	dicarboxylate/tricarboxylate carrier (DTC)	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.95	TaAffx.36684.1.A1_at	BJ319782	-	-	2e-1	At5g14690	unknown protein	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.95	TaAffx.5547.1.S1_at	CA707355	-	-	4e+0	At5g50740	metal ion binding	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.95	Ta.13051.1.S1_at	CA486369	-	-	9e-2	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.95	TaAffx.105889.1.S1_s_at	CA728431	-	-	1e+0	At3g61260	DNA-binding family protein / remorin family protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.95	Ta.8195.2.S1_at	CD875760	-	-	2e-6	At1g68010	HPR	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	TaAffx.113756.1.S1_at	CA605644	-	-	1e-3	At5g04250	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.95	TaAffx.107754.1.S1_at	CD876350	-	-	1e+0	At2g21780	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	99.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.1	99.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.5	98.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.4	96.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage