Co-expression analysis

Gene ID Ta.26450.1.A1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g70700: TIFY7 (HF=3e-2)
Module size 16 genes
NF 0.39
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.80Ta.26450.1.A1_s_atCD490882--3e-2At1g70700TIFY7O.I.H.G.S.X.
0.5173.00.83TaAffx.113344.2.S1_atCA601857--1e+1At5g43460lesion inducing protein-relatedO.I.H.G.S.X.
0.4565.20.88Ta.18865.1.A1_atCK208332--5e+0At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.4565.20.85TaAffx.119175.1.A1_s_atBJ285398--4e+0At5g65040senescence-associated protein-relatedO.I.H.G.S.X.
0.4260.90.89TaAffx.64763.1.S1_atBJ282605--6e+0At4g13100zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4159.60.86Ta.1666.1.S1_a_atBE443619--4e-1At2g32100OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)O.I.H.G.S.X.
0.4058.40.91Ta.25629.1.S1_atCD373595--2e-1At3g28200peroxidase, putativeO.I.H.G.S.X.
0.3854.70.87Ta.25454.1.S1_atCA638730--6e-4At3g58120BZIP61O.I.H.G.S.X.
0.3651.90.85Ta.24985.1.S1_atCA649858--2e+1At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3346.90.89TaAffx.31545.1.S1_atCA613407--1e+0At4g16220hydrolase, acting on ester bondsO.I.H.G.S.X.
0.3346.90.91Ta.14141.1.A1_atBE443910--4e+0At1g44890unknown proteinO.I.H.G.S.X.
0.3244.40.84Ta.19327.1.S1_atCA650420--3e+0At5g64541unknown proteinO.I.H.G.S.X.
0.3244.40.91Ta.6340.1.S1_atBJ308386--1e+0At2g34280S locus F-box-related / SLF-relatedO.I.H.G.S.X.
0.3040.90.89Ta.5091.3.S1_x_atCK197746--1e-30At5g18170GDH1 (GLUTAMATE DEHYDROGENASE 1)O.I.H.G.S.X.
0.2735.60.86Ta.7811.2.A1_x_atBQ160724--1e+0At5g40370glutaredoxin, putativeO.I.H.G.S.X.
0.2227.10.87Ta.14482.1.S1_atBJ214882--2e-16At1g10200WLIM1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.299.2GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.998.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.698.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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