Co-expression analysis

Gene ID	Ta.26188.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g02720: DJ-1 family protein / protease-related (HF=6e-1)
Module size	16 genes
NF	0.42
%ile	67.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.86	Ta.26188.1.A1_at	CD452630	-	-	6e-1	At3g02720	DJ-1 family protein / protease-related	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.90	TaAffx.63920.1.A1_x_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.89	TaAffx.63920.1.A1_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	Ta.8896.2.S1_a_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.91	Ta.25946.1.A1_at	CD454681	-	-	5e+0	At5g44585	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.90	Ta.8896.2.S1_x_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.92	Ta.8896.1.S1_x_at	CK153405	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.92	Ta.4779.1.S1_at	BJ271542	-	-	9e-1	At5g20920	EIF2 BETA	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.89	Ta.9451.2.S1_x_at	BQ838583	-	-	3e-1	At4g36430	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.91	Ta.3596.2.A1_x_at	BJ266692	-	-	3e-10	At5g15490	UDP-glucose 6-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.90	TaAffx.9339.1.S1_at	CA601993	-	-	2e+0	At3g56220	transcription regulator	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.92	Ta.9451.1.S1_x_at	CD492101	-	-	4e-2	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.90	Ta.25838.1.A1_at	CD453571	-	-	2e+1	At5g23160	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.89	Ta.18965.2.S1_at	CA608704	-	-	7e-2	At1g22480	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.89	TaAffx.64631.1.A1_at	BJ284527	-	-	5e+0	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.90	Ta.13168.3.S1_x_at	CA604430	-	-	2e+1	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.0	99.7	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
18.4	99.7	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
18.2	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
17.8	99.7	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
17.5	99.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
14.3	99.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
13.3	99.5	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.6	97.8	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.7	95.8	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.1	94.5	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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