Co-expression analysis

Gene ID	Ta.26169.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g78170: unknown protein (HF=1e+0)
Module size	27 genes
NF	0.51
%ile	77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.85	93.8	0.94	Ta.26169.1.A1_at	CD452458	-	-	1e+0	At1g78170	unknown protein	O.I.	H.G.	S.X.	Please select
0.69	86.9	0.96	Ta.14344.1.S1_at	BU101208	-	-	1e+0	At2g44520	COX10 (cytochrome c oxidase 10)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	Ta.16838.1.S1_s_at	CA613525	-	-	2e+0	At4g21865	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.21050.1.S1_at	CA603437	-	-	1e-2	At4g26010	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.66	84.1	0.96	Ta.12850.1.A1_at	CA643781	-	-	6e-1	At1g31170	SRX (SULFIREDOXIN)	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.96	Ta.12879.1.S1_at	CD490901	-	-	1e+0	At1g07750	cupin family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.95	Ta.5252.2.S1_s_at	CA639061	-	-	4e+0	Atmg00480	-	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	Ta.16217.1.S1_at	CA602728	-	-	2e+0	At3g22090	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.97	Ta.16155.1.A1_at	CD452958	-	-	5e+0	At1g71695	peroxidase 12 (PER12) (P12) (PRXR6)	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.96	Ta.8897.1.A1_at	BQ162591	-	-	4e+0	At2g12405	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.96	Ta.21079.1.S1_at	CA646768	-	-	1e+0	At3g48660	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.1591.1.S1_at	BE442879	-	-	3e+1	At5g44110	POP1	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	Ta.14580.1.S1_at	CK199688	-	-	3e-3	At3g21770	peroxidase 30 (PER30) (P30) (PRXR9)	O.I.	H.G.	S.X.	Please select
0.51	73.0	0.97	Ta.14344.1.S1_s_at	BU101208	-	-	1e+0	At2g44520	COX10 (cytochrome c oxidase 10)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.14339.1.A1_at	CA613364	-	-	1e+0	At1g60913	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.111224.1.S1_x_at	CA645393	-	-	2e+0	At3g48660	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	TaAffx.64660.1.A1_at	BJ282547	-	-	2e-2	At1g73510	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.96	TaAffx.128553.1.S1_at	CK201540	-	-	4e-2	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.977.2.S1_x_at	CA649814	-	-	9e-1	At3g01980	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	Ta.13041.1.S1_at	CK193131	-	-	5e-1	At3g03150	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.97	TaAffx.111224.1.S1_at	CA645393	-	-	2e+0	At3g48660	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	TaAffx.29060.1.S1_s_at	CA651300	-	-	3e+0	At3g48660	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.95	Ta.937.1.A1_at	BE443499	-	-	1e+0	At3g12260	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	Ta.5426.2.A1_a_at	BJ282865	-	-	3e-1	At1g13080	CYP71B2 (CYTOCHROME P450 71B2)	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.96	Ta.26259.1.S1_at	BQ294734	-	-	4e+0	At2g32360	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.97	Ta.1840.1.S1_x_at	CK152019	protease inhibitor-like protein	-	8e+0	Atmg01300	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.20756.1.S1_x_at	CK197465	-	-	6e+0	At5g64650	ribosomal protein L17 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.7	99.7	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
19.5	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
17.1	99.6	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
11.9	99.4	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
10.8	99.2	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.1	98.5	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.4	97.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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