Co-expression analysis

Gene ID	Ta.26066.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g21110: PUR7 (PURIN 7) (HF=7e-13)
Module size	6 genes
NF	0.08
%ile	19.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.96	Ta.26066.1.S1_at	CD452401	-	-	7e-13	At3g21110	PUR7 (PURIN 7)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.97	Ta.13282.1.S1_at	CD373866	-	-	5e-8	At1g48650	helicase domain-containing protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.6823.1.A1_at	BQ168375	-	-	7e-9	At1g12910	ATAN11 (ANTHOCYANIN11)	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.14271.1.S1_at	BQ838640	-	-	3e-34	At5g46210	CUL4 (CULLIN4)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.97	Ta.1816.1.S1_at	AJ614274	-	-	2e+0	At5g06200	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.97	Ta.5100.2.S1_at	BJ272656	-	-	5e-34	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.7	99.5	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
12.6	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
12.5	99.4	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
10.6	99.2	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
9.5	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM250906	TcLr34_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250911	TcLr34_7dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

A co-expression module including the maize gene, Zm.1465.1.A1_at, orthologous to the query gene, Ta.26066.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	Zm.1465.1.A1_at	At3g21110	-	-	7e-6	At3g21110	PUR7 (PURIN 7)	O.I.	H.G.	S.X.	Please select
0.48	61.3	ZmAffx.1075.1.A1_at	At3g21110	-	-	1e+1	At5g10130	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	ZmAffx.1061.1.S1_at	At3g21110	hypothetical protein LOC100193941	-	2e-1	At4g22160	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	56.4	Zm.2266.1.A1_s_at	At3g21110	-	-	5e+0	At3g44940	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	45.6	Zm.12454.1.A1_at	At3g21110	hypothetical protein LOC100273736	-	6e-3	At1g10640	polygalacturonase	O.I.	H.G.	S.X.	Please select
0.38	44.2	Zm.2033.1.A1_at	At3g21110	hypothetical protein LOC100274598	-	2e+0	At1g19160	-	O.I.	H.G.	S.X.	Please select
0.36	41.3	Zm.6767.1.S1_at	At3g21110	hypothetical protein LOC100216595	-	3e-28	At1g52930	brix domain-containing protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	Zm.16763.2.S1_a_at	At3g21110	hypothetical protein LOC100193074	-	1e-1	At5g41570	WRKY24	O.I.	H.G.	S.X.	Please select
0.30	29.8	Zm.2062.1.S1_at	At3g21110	hypothetical protein LOC100280421	-	6e+0	At5g39360	EDL2 (EID1-like 2)	O.I.	H.G.	S.X.	Please select
0.28	28.1	Zm.2008.1.A1_at	At3g21110	hypothetical protein LOC100279662	-	8e-8	At3g02990	ATHSFA1E	O.I.	H.G.	S.X.	Please select
0.27	24.6	Zm.13979.1.S1_at	At3g21110	hypothetical protein LOC100273275	-	8e-22	At2g20130	LCV1 (LIKE COV 1)	O.I.	H.G.	S.X.	Please select
0.26	22.7	Zm.13662.1.A1_at	At3g21110	-	-	4e+0	At2g40740	WRKY55	O.I.	H.G.	S.X.	Please select
0.20	14.2	Zm.2399.1.A1_at	At3g21110	hypothetical protein LOC100216933	-	4e-4	At5g08450	-	O.I.	H.G.	S.X.	Please select
0.17	10.6	Zm.18012.1.A1_at	At3g21110	-	-	2e-3	At5g48950	thioesterase family protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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