Co-expression analysis

Gene ID	Ta.26049.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At4g38620: MYB4 (HF=1e-42)
Module size	6 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.88	Ta.26049.1.S1_a_at	CD454952	-	-	1e-42	At4g38620	MYB4	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.88	Ta.29352.1.S1_at	CK163855	-	-	2e+0	At2g21490	LEA (DEHYDRIN LEA)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.85	TaAffx.128555.1.S1_at	CK163818	-	-	4e-1	At2g21490	LEA (DEHYDRIN LEA)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.88	Ta.29352.1.S1_x_at	CK163855	-	-	2e+0	At2g21490	LEA (DEHYDRIN LEA)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.88	TaAffx.12097.1.A1_at	BJ295537	-	-	5e+0	At5g59080	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.90	Ta.13682.1.A1_at	BQ171887	-	-	2e-1	At4g24220	VEP1 (VEIN PATTERNING 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.0	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
15.4	99.6	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.5	99.4	GSM250911	TcLr34_7dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.2	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM250906	TcLr34_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250917	TcLr34_7dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM250888	TcLr34_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250905	TcLr34_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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