Co-expression analysis

Gene ID Ta.25857.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g42680: myosin-related (HF=9e-5)
Module size 27 genes
NF 0.34
%ile 54.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.90Ta.25857.1.A1_atCD453562--9e-5At1g42680myosin-relatedO.I.H.G.S.X.
0.5779.20.92TaAffx.22799.1.S1_atCA744836--2e-29At5g04140GLU1 (GLUTAMATE SYNTHASE 1)O.I.H.G.S.X.
0.4969.70.94TaAffx.81489.1.S1_atCA685448--1e-20At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)O.I.H.G.S.X.
0.4666.80.94TaAffx.81295.1.S1_atCA687753--9e-1At5g60330unknown proteinO.I.H.G.S.X.
0.4464.50.93TaAffx.32117.1.S1_atCA600589--1e+0At3g21840ASK7 (ARABIDOPSIS SKP1-LIKE 7)O.I.H.G.S.X.
0.4464.50.93TaAffx.71622.1.S1_atCA694216--2e-2At3g59580RWP-RK domain-containing proteinO.I.H.G.S.X.
0.4362.20.96TaAffx.65463.1.S1_atBJ245061--3e-1At4g31390ABC1 family proteinO.I.H.G.S.X.
0.4159.60.94TaAffx.109309.1.S1_atCA677197--2e+0At4g13540unknown proteinO.I.H.G.S.X.
0.3956.10.94TaAffx.99246.1.S1_atBG909536--3e-5At1g54570esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.3651.90.95TaAffx.64340.1.S1_atBJ303604--8e-3At3g11560unknown proteinO.I.H.G.S.X.
0.3651.90.93TaAffx.3979.2.S1_atCA656172--3e+0At2g39570ACT domain-containing proteinO.I.H.G.S.X.
0.3549.80.95Ta.2946.3.S1_atBJ207850--4e+0At3g25719unknown proteinO.I.H.G.S.X.
0.3549.80.95TaAffx.95372.1.S1_atCD874541--5e+0At5g03520ATRAB8CO.I.H.G.S.X.
0.3448.10.94TaAffx.107839.1.S1_atCA694583--4e+0At4g32890zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3346.90.92TaAffx.1119.1.A1_atCK212688--1e+0At3g52525OFP6 (OVATE FAMILY PROTEIN 6)O.I.H.G.S.X.
0.3142.70.96TaAffx.64340.1.S1_s_atBJ303604--8e-3At3g11560unknown proteinO.I.H.G.S.X.
0.3040.90.93Ta.6973.2.S1_atBJ313299--2e-13At4g22120early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.
0.3040.90.93TaAffx.25828.1.S1_atCA695502--4e+0At4g27280calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2939.20.93Ta.5400.2.S1_atBJ246556--1e+0At1g17080unknown proteinO.I.H.G.S.X.
0.2735.60.96TaAffx.110610.1.S1_s_atCA689770--1e+1At5g40981unknown proteinO.I.H.G.S.X.
0.2735.60.94TaAffx.65402.1.S1_atBJ247749--1e+0At5g43840AT-HSFA6AO.I.H.G.S.X.
0.2735.60.94TaAffx.87058.1.S1_atCA662968--1e-10At5g42390metalloendopeptidaseO.I.H.G.S.X.
0.2430.30.96Ta.1158.3.S1_a_atBE418734--5e-2At1g07110F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)O.I.H.G.S.X.
0.2430.30.93TaAffx.119260.1.S1_atCF182121--6e+0At5g40630ubiquitin family proteinO.I.H.G.S.X.
0.2227.10.96TaAffx.4786.1.S1_atCA731931--4e-3At4g18810binding / catalytic/ transcription repressorO.I.H.G.S.X.
0.1922.40.94Ta.7213.2.S1_atBJ270436--5e-7At4g02260RSH1 (RELA-SPOT HOMOLOG 1)O.I.H.G.S.X.
0.1314.60.94TaAffx.123343.1.S1_atBG909665--2e-3At4g25290DNA photolyaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.899.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.596.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.994.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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