Co-expression analysis

Gene ID Ta.25810.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g10310: unknown protein (HF=1e+0)
Module size 8 genes
NF 0.59
%ile 85.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.90Ta.25810.1.A1_atCD374040--1e+0At5g10310unknown proteinO.I.H.G.S.X.
0.6786.30.91TaAffx.52385.1.S1_atCA708316--4e+0At1g05930DNA bindingO.I.H.G.S.X.
0.6383.10.92Ta.7698.3.S1_atCA636022--2e+1At5g60615-O.I.H.G.S.X.
0.6383.10.93TaAffx.78823.1.S1_atCA726815--4e+0At5g26840unknown proteinO.I.H.G.S.X.
0.6081.00.91Ta.17218.1.S1_atCA618872--2e+1At5g08260scpl35 (serine carboxypeptidase-like 35)O.I.H.G.S.X.
0.5779.20.91Ta.24307.1.A1_atAL822297cytokinin dehydrogenase-1e+0At2g03570unknown proteinO.I.H.G.S.X.
0.4464.50.92TaAffx.52324.1.S1_atCA709316--1e+0At2g21220auxin-responsive protein, putativeO.I.H.G.S.X.
0.4362.20.91TaAffx.113686.2.S1_atCA607016--2e+1At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.499.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.299.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.698.9GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.598.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.498.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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