Co-expression analysis

Gene ID	Ta.25810.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g10310: unknown protein (HF=1e+0)
Module size	8 genes
NF	0.59
%ile	85.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.90	Ta.25810.1.A1_at	CD374040	-	-	1e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	TaAffx.52385.1.S1_at	CA708316	-	-	4e+0	At1g05930	DNA binding	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.92	Ta.7698.3.S1_at	CA636022	-	-	2e+1	At5g60615	-	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.93	TaAffx.78823.1.S1_at	CA726815	-	-	4e+0	At5g26840	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.91	Ta.17218.1.S1_at	CA618872	-	-	2e+1	At5g08260	scpl35 (serine carboxypeptidase-like 35)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.91	Ta.24307.1.A1_at	AL822297	cytokinin dehydrogenase	-	1e+0	At2g03570	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.92	TaAffx.52324.1.S1_at	CA709316	-	-	1e+0	At2g21220	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.91	TaAffx.113686.2.S1_at	CA607016	-	-	2e+1	At3g56130	biotin/lipoyl attachment domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.4	99.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.2	99.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.6	98.9	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
8.5	98.9	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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