Co-expression analysis

Gene ID	Ta.25722.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g30590: WRKY21 (HF=2e-2)
Module size	6 genes
NF	0.09
%ile	21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.91	Ta.25722.1.A1_at	CD374046	-	-	2e-2	At2g30590	WRKY21	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.96	Ta.6993.1.S1_at	BJ313539	-	-	1e-2	At4g34290	SWIB complex BAF60b domain-containing protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.11933.1.A1_at	AJ612111	-	-	2e+1	At5g35995	F-box family protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.95	Ta.20533.1.S1_x_at	CA612961	-	-	4e-2	At5g46410	NLI interacting factor (NIF) family protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.96	Ta.25692.1.S1_at	CD454209	-	-	2e-1	At3g01610	CDC48C	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.96	Ta.6987.1.A1_at	BJ319194	-	-	4e+0	At1g07610	MT1C	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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