Co-expression analysis

Gene ID Ta.25487.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g23260: ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (HF=3e-2)
Module size 28 genes
NF 0.45
%ile 70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8794.20.91Ta.25487.1.S1_atCD373987--3e-2At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.5879.20.93Ta.25391.1.S1_atCD373720--4e-5At4g24890PAP24 (PURPLE ACID PHOSPHATASE 24)O.I.H.G.S.X.
0.5678.60.95TaAffx.104820.1.S1_atCA744357--5e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.5678.60.94TaAffx.21249.1.S1_x_atCA706624--3e+1At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.H.G.S.X.
0.5576.80.93TaAffx.3623.1.A1_atCD878203--2e+0At3g17400F-box family proteinO.I.H.G.S.X.
0.5475.50.93TaAffx.108174.1.S1_atBQ803356--2e+0At3g43850unknown proteinO.I.H.G.S.X.
0.5374.90.92TaAffx.120890.1.S1_x_atCA688266--2e+1At4g16510YbaK/prolyl-tRNA synthetase-relatedO.I.H.G.S.X.
0.5173.00.94TaAffx.21249.1.S1_atCA706624--3e+1At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.H.G.S.X.
0.4869.00.94TaAffx.110067.1.S1_atCD884065--5e+0At4g02770PSAD-1 (photosystem I subunit D-1)O.I.H.G.S.X.
0.4869.00.96Ta.12007.2.S1_atBG907089--2e-6At4g18250receptor serine/threonine kinase, putativeO.I.H.G.S.X.
0.4464.50.94Ta.21314.1.S1_x_atCA669694--9e+0At1g78020senescence-associated protein-relatedO.I.H.G.S.X.
0.4362.20.93Ta.11774.1.A1_atBQ170770--2e-1At4g28530anac074 (Arabidopsis NAC domain containing protein 74)O.I.H.G.S.X.
0.4362.20.94Ta.21314.1.S1_atCA669694--9e+0At1g78020senescence-associated protein-relatedO.I.H.G.S.X.
0.4159.60.94Ta.21711.1.S1_atCD883645--5e-9At1g22150SULTR1O.I.H.G.S.X.
0.4159.60.90TaAffx.82706.1.S1_atCA668277--1e+1At3g13730CYP90D1O.I.H.G.S.X.
0.4159.60.95Ta.1454.3.S1_atCA737124--2e-1At1g35830VQ motif-containing proteinO.I.H.G.S.X.
0.4058.40.91Ta.26048.1.S1_x_atCD454944--3e+1At5g42100ATBG_PAPO.I.H.G.S.X.
0.4058.40.94TaAffx.12418.1.A1_atBJ265615--5e-12At5g38240serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.3956.10.95Ta.15082.1.S1_atCA689233--1e+0At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.3956.10.95Ta.15082.1.S1_x_atCA689233--1e+0At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.3854.70.94Ta.4479.3.S1_atCA655446--4e-4At3g04800ATTIM23-3O.I.H.G.S.X.
0.3651.90.93TaAffx.134015.1.S1_x_atBQ606320--5e+0At1g62333unknown proteinO.I.H.G.S.X.
0.3651.90.93TaAffx.89683.1.S1_atCA654096--2e-3At2g16250leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3549.80.94TaAffx.110081.1.S1_atCA660871--7e+0At5g13180ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)O.I.H.G.S.X.
0.3448.10.94Ta.23348.1.A1_atBJ229076--8e+0At4g07380unknown proteinO.I.H.G.S.X.
0.3448.10.92Ta.19786.1.A1_atCA658969--3e-1At4g27590copper-binding protein-relatedO.I.H.G.S.X.
0.3346.90.93TaAffx.110081.1.S1_x_atCA660871--7e+0At5g13180ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)O.I.H.G.S.X.
0.3040.90.95Ta.11397.1.A1_atBQ170011--5e+0At5g57420IAA33 (INDOLE-3-ACETIC ACID INDUCIBLE 33)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.199.7GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.197.5GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.096.3GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.695.6GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.595.4GSM143522Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.395.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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