Co-expression analysis

Gene ID	Ta.25476.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g67640: unknown protein (HF=4e-4)
Module size	10 genes
NF	0.37
%ile	59.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.52	73.7	0.86	Ta.25476.1.S1_at	CD454009	-	-	4e-4	At5g67640	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.92	Ta.14513.1.S1_a_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.93	Ta.14513.1.S1_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.89	Ta.12546.1.S1_at	BQ171039	-	-	1e-1	At2g46375	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.92	TaAffx.114664.3.S1_s_at	CA735933	-	-	6e-4	At1g77855	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.92	TaAffx.114664.2.A1_at	BJ274528	-	-	1e+0	At2g21740	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.91	Ta.4580.3.S1_a_at	CA641681	calcium-dependent protein kinase	-	4e-3	At3g57530	CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.90	TaAffx.38522.1.A1_at	BJ221646	-	-	3e-1	At2g01200	IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	Ta.15094.1.S1_x_at	CA689877	-	-	9e-1	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.89	Ta.7186.2.A1_at	BJ252487	-	-	2e+1	At5g06430	thioredoxin-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.9	99.3	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.3	97.6	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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