Co-expression analysis

Gene ID	Ta.25400.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g62060: unknown protein (HF=1e-1)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.96	Ta.25400.1.A1_at	CD490744	-	-	1e-1	At1g62060	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.30013.1.S1_at	CK213051	-	-	1e-18	At5g14390	-	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.18356.1.S1_at	CA635027	-	-	3e+0	At1g48000	MYB112 (myb domain protein 112)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	Ta.17601.1.S1_at	CA622316	-	-	4e+0	At5g58530	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	TaAffx.106849.3.S1_at	BJ216171	-	-	1e-1	At4g39410	WRKY13	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	Ta.28609.1.S1_x_at	CK217364	-	-	8e-15	At2g19750	40S ribosomal protein S30 (RPS30A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.6	95.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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