Co-expression analysis

Gene ID Ta.25343.1.A1_at
Gene name MADS-box transcription factor TaAGL7
Homology with ArabidopsisSimilar to At2g45660: AGL20 (AGAMOUS-LIKE 20) (HF=1e-7)
Module size 6 genes
NF 0.48
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.92Ta.25343.1.A1_atCD374116MADS-box transcription factor TaAGL7-1e-7At2g45660AGL20 (AGAMOUS-LIKE 20)O.I.H.G.S.X.
0.8393.40.94Ta.6017.2.S1_a_atBJ208849--1e-3At5g24610unknown proteinO.I.H.G.S.X.
0.8092.20.95Ta.6017.1.S1_atBQ802304--8e-4At5g24610unknown proteinO.I.H.G.S.X.
0.6786.30.93Ta.10896.1.S1_x_atBQ166780--4e+0At2g35950EDA12 (embryo sac development arrest 12)O.I.H.G.S.X.
0.6081.00.94Ta.6017.3.S1_s_atCA634829--4e+0At3g43722unknown proteinO.I.H.G.S.X.
0.1011.30.94Ta.20812.1.S1_atCA621715--2e-28At3g18290EMB2454 (embryo defective 2454)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.4GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.896.0GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.695.6GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.695.6GSM143496Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.395.0GSM143510Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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