Co-expression analysis

Gene ID	Ta.25248.1.A1_at
Gene name
Homology with Arabidopsis	Similar to Atmg01090: - (HF=2e+0)
Module size	6 genes
NF	0.12
%ile	24.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.95	Ta.25248.1.A1_at	CD454523	-	-	2e+0	Atmg01090	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.16784.1.S1_at	CA612578	-	-	4e-6	At2g23140	binding / ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.98	Ta.14174.1.S1_at	BG263414	-	-	3e-3	At1g49590	formin-binding protein-related	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.98	Ta.11736.1.A1_at	BQ170705	-	-	1e+0	At4g24950	unknown protein	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.97	Ta.5090.1.S1_x_at	CK168310	-	-	4e-25	At5g11980	conserved oligomeric Golgi complex component-related / COG complex component-related	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.98	Ta.25019.1.S1_at	BT009274.1	-	-	9e-5	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.8	98.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1	96.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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