Co-expression analysis

Gene ID Ta.24987.1.S1_at
Gene name Cytosolic malate dehydrogenase
Homology with ArabidopsisSimilar to At5g43330: malate dehydrogenase, cytosolic, putative (HF=1e-64)
Module size 15 genes
NF 0.71
%ile 93.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.98Ta.24987.1.S1_atCK166034Cytosolic malate dehydrogenase-1e-64At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.8694.10.99Ta.659.7.A1_x_atBJ306943--1e-161At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.8593.80.99Ta.659.2.S1_x_atCN012989Translation elongation factor 1 alpha-subunit-0At5g60390elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.8192.40.98Ta.2576.2.S1_atBJ321004Elongation factor-1e-97At1g56070LOS1O.I.H.G.S.X.
0.8192.40.99Ta.659.4.S1_a_atCD878208--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.8092.20.99Ta.27117.6.S1_x_atBJ262049--1e-12At3g0852060S ribosomal protein L41 (RPL41D)O.I.H.G.S.X.
0.7991.30.99Ta.659.6.S1_x_atBJ282457--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.7790.80.99Ta.27117.2.S1_a_atCD862365--2e-15At2g4020560S ribosomal protein L41 (RPL41C)O.I.H.G.S.X.
0.7589.80.99Ta.659.3.S1_x_atCD878859Translation elongation factor 1 alpha-subunit-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.6986.90.99Ta.659.1.S1_x_atBI751166Translation elongation factor 1 alpha-subunit-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.6583.90.99Ta.659.1.S1_atBI751166Translation elongation factor 1 alpha-subunit-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.5879.20.99Ta.13509.2.S1_a_atBJ285087--3e-24At3g54560HTA11O.I.H.G.S.X.
0.5576.80.99TaAffx.115437.1.A1_s_atBG607902--4e+0At2g43540unknown proteinO.I.H.G.S.X.
0.5576.80.99Ta.1532.1.S1_a_atBJ231467eukaryotic translation initiation factor 5A3-2e-6At1g26630FBR12 (FUMONISIN B1-RESISTANT12)O.I.H.G.S.X.
0.4464.50.99Ta.27713.1.A1_x_atCD879558elongation factor-1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
9.199.0GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.798.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.398.8GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.994.0GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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