Co-expression analysis

Gene ID Ta.24610.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g10525: - (HF=1e+0)
Module size 15 genes
NF 0.25
%ile 41.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6282.30.95Ta.24610.2.S1_a_atCA700421--1e+0At3g10525-O.I.H.G.S.X.
0.3549.80.97Ta.25939.1.A1_atBF199827--4e-1At2g36145unknown proteinO.I.H.G.S.X.
0.3448.10.97Ta.9779.1.A1_atBJ231265--4e-1At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3346.90.97TaAffx.13750.1.S1_s_atCD916252--2e+0At3g04090SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.3244.40.97Ta.20773.2.S1_atCA601555--4e+0At3g15352ATCOX17O.I.H.G.S.X.
0.3244.40.97Ta.10861.1.A1_atCD898736--5e-1At2g04025unknown proteinO.I.H.G.S.X.
0.3244.40.97Ta.4554.1.S1_atCD917148--3e+0At5g35698-O.I.H.G.S.X.
0.2633.60.97TaAffx.20586.1.S1_atCA595652--4e+0At3g46300unknown proteinO.I.H.G.S.X.
0.2633.60.96TaAffx.13750.1.S1_atCD916252--2e+0At3g04090SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.2329.00.96TaAffx.2433.1.S1_atCA601863--4e+0At1g04190tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.2329.00.97Ta.27239.1.S1_atBT009586.1--3e-18At5g17020XPO1AO.I.H.G.S.X.
0.1415.80.97Ta.27549.1.S1_atBT009081.1--1e-14At3g20740FIE (FERTILIZATION-INDEPENDENT ENDOSPERM)O.I.H.G.S.X.
0.1415.80.97TaAffx.20734.1.S1_atBE419138--2e+0At3g01472CPuORF33 (Conserved peptide upstream open reading frame 33)O.I.H.G.S.X.
0.1314.60.97Ta.11129.1.S1_atCD890092--3e-34At3g11540SPY (SPINDLY)O.I.H.G.S.X.
0.1213.30.96Ta.22146.2.S1_x_atCA641760--1e+0At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.799.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.498.9GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.797.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM298058Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM111241genotype F82 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.695.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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