Co-expression analysis

Gene ID	Ta.24515.1.S1_at
Gene name	HSP70
Homology with Arabidopsis	Similar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=9e-122)
Module size	7 genes
NF	0.57
%ile	83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.92	Ta.24515.1.S1_at	AF005993.1	HSP70	-	9e-122	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.30802.1.A1_at	CA702016	-	-	2e-21	At3g12580	HSP70 (heat shock protein 70)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.30802.1.A1_x_at	CA702016	-	-	2e-21	At3g12580	HSP70 (heat shock protein 70)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.9196.1.S1_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.1274.1.S1_x_at	CK194462	-	-	3e+0	At1g30070	SGS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.9196.1.S1_x_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.1274.1.S1_a_at	CK194462	-	-	3e+0	At1g30060	COP1-interacting protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	96.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

A co-expression module including the maize gene, Zm.191.1.A1_at, orthologous to the query gene, Ta.24515.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	Zm.191.1.A1_at	At5g02500	-	-	3e-121	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.47	59.9	Zm.13800.1.A1_at	At5g02500	hypothetical protein LOC100273643	-	3e-18	At1g17350	auxin-induced-related / indole-3-acetic acid induced-related	O.I.	H.G.	S.X.	Please select
0.46	58.4	Zm.9565.1.A1_at	At5g02500	beta-expansin 3	-	6e-1	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	Zm.1263.1.A1_at	At5g02500	hypothetical protein LOC100274372	-	1e-7	At3g51820	G4	O.I.	H.G.	S.X.	Please select
0.36	41.3	Zm.18469.1.S1_at	At5g02500	oxidoreductase	-	2e-7	At4g13250	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	Zm.18283.1.A1_at	At5g02500	hypothetical protein LOC100217202 /// hypothetical protein LOC100217213	-	5e+0	At5g49540	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	Zm.15052.1.A1_at	At5g02500	hypothetical protein LOC100272512 /// hypothetical protein LOC100278776	-	4e-1	At1g80840	WRKY40	O.I.	H.G.	S.X.	Please select
0.16	9.4	Zm.10077.1.A1_at	At5g02500	glycine-rich protein	-	7e-1	At3g07560	PEX13 (PEROXIN 13)	O.I.	H.G.	S.X.	Please select
0.14	7.7	Zm.13226.2.A1_at	At5g02500	40S ribosomal protein S9	-	1e-41	At5g39850	40S ribosomal protein S9 (RPS9C)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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