Co-expression analysis

Gene ID	Ta.24515.1.S1_at
Gene name	HSP70
Homology with Arabidopsis	Similar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=9e-122)
Module size	7 genes
NF	0.57
%ile	83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.92	Ta.24515.1.S1_at	AF005993.1	HSP70	-	9e-122	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.30802.1.A1_at	CA702016	-	-	2e-21	At3g12580	HSP70 (heat shock protein 70)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.30802.1.A1_x_at	CA702016	-	-	2e-21	At3g12580	HSP70 (heat shock protein 70)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.9196.1.S1_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.1274.1.S1_x_at	CK194462	-	-	3e+0	At1g30070	SGS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.9196.1.S1_x_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.1274.1.S1_a_at	CK194462	-	-	3e+0	At1g30060	COP1-interacting protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	96.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.249.10.S1_x_at, orthologous to the query gene, Ta.24515.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	84.9	PtpAffx.249.10.S1_x_at	At5g02500	hypothetical protein	-	0	At3g09440	heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	Ptp.4621.1.A1_a_at	At5g02500	hypothetical protein	-	2e-123	At5g28840	GME (GDP-D-MANNOSE 3',5'-EPIMERASE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	PtpAffx.4106.1.A1_s_at	At5g02500	hypothetical protein	-	1e-4	At3g03530	NPC4 (NONSPECIFIC PHOSPHOLIPASE C4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	Ptp.1767.1.A1_s_at	At5g02500	hypothetical protein	-	9e-2	At3g54110	PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	PtpAffx.211939.1.S1_s_at	At5g02500	hypothetical protein	-	1e-37	At2g04280	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	PtpAffx.3647.1.A1_at	At5g02500	hypothetical protein	-	9e-5	At2g26680	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Vitis_vinifera

Zea_mays

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