Co-expression analysis

Gene ID	Ta.24363.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g22950: AGL19 (AGAMOUS-LIKE 19) (HF=8e+0)
Module size	15 genes
NF	0.35
%ile	56.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.68	86.5	0.96	Ta.24363.1.S1_at	BJ228679	-	-	8e+0	At4g22950	AGL19 (AGAMOUS-LIKE 19)	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.97	Ta.9195.1.A1_at	BJ287416	-	-	2e+0	At1g78630	emb1473 (embryo defective 1473)	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.97	Ta.9195.1.A1_x_at	BJ287416	-	-	2e+0	At1g78630	emb1473 (embryo defective 1473)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.97	Ta.7677.1.S1_x_at	CK194882	-	-	5e-58	At2g44100	ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.7677.2.S1_a_at	CK194307	-	-	2e+1	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.10310.1.S1_a_at	BJ238630	Vacuolar proton-ATPase D subunit	-	1e-26	At3g28715	H+-transporting two-sector ATPase, putative	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.14524.1.S1_at	CK193637	-	-	6e-1	At3g26790	FUS3 (FUSCA 3)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.98	Ta.26017.1.A1_at	CK212016	-	-	6e-7	At3g25540	LAG1	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.25456.1.S1_at	BJ226883	-	-	1e-8	At2g37860	LCD1 (LOWER CELL DENSITY 1)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.2863.1.S1_s_at	CK210585	-	-	2e-8	At2g21510	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.97	Ta.6166.1.S1_at	BQ170305	-	-	7e-41	At2g19830	SNF7.2	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.6588.1.A1_at	CK161154	-	-	1e-24	At5g06140	SNX1 (SORTING NEXIN 1)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.97	Ta.9314.1.S1_at	CA663200	-	-	7e-7	At4g19003	VPS25	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.98	Ta.14051.1.S1_at	CK195591	-	-	1e-5	At2g38020	VCL1 (VACUOLELESS 1)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.22731.1.S1_a_at	BJ276668	-	-	9e-9	At5g55510	P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.2	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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