Co-expression analysis

Gene ID	Ta.24211.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g12880: proline-rich family protein (HF=4e+0)
Module size	7 genes
NF	0.69
%ile	92.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.99	Ta.24211.1.A1_at	BJ253644	-	-	4e+0	At5g12880	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	1.00	Ta.4006.1.A1_at	BJ251617	-	-	8e-2	At5g51880	iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	O.I.	H.G.	S.X.	Please select
0.67	86.3	1.00	Ta.11917.1.A1_at	BQ171063	-	-	1e+0	At3g10890	(1-4)-beta-mannan endohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	1.00	Ta.10386.1.A1_at	BJ249523	-	-	1e-1	At1g29610	-	O.I.	H.G.	S.X.	Please select
0.60	81.0	1.00	TaAffx.65316.1.A1_at	BJ251198	-	-	4e+0	At5g14602	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	1.00	Ta.12014.1.A1_a_at	BJ250107	-	-	3e-1	At4g33680	AGD2 (ABERRANT GROWTH AND DEATH 2)	O.I.	H.G.	S.X.	Please select
0.53	74.9	1.00	TaAffx.119697.1.A1_at	BJ261932	-	-	4e+0	At4g27900	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.1	99.8	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
22.9	99.8	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
20.7	99.7	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.9	99.3	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
10.8	99.2	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
10.5	99.2	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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