Co-expression analysis

Gene ID	Ta.24202.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g33640: unknown protein (HF=7e+0)
Module size	6 genes
NF	0.48
%ile	74.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.97	Ta.24202.1.S1_s_at	CA693707	-	-	7e+0	At4g33640	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.6101.1.S1_at	CD937323	-	-	2e-10	At3g48890	ATMP2	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.28730.1.S1_at	BJ261271	-	-	2e-7	At3g63310	glutamate binding	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.22715.2.A1_at	CD873981	-	-	3e-12	At2g20840	secretory carrier membrane protein (SCAMP) family protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.6113.1.S1_a_at	CA668966	-	-	3e+0	At5g22300	NIT4 (NITRILASE 4)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.20778.3.A1_at	CA710788	-	-	2e-1	At5g62040	brother of FT and TFL1 protein (BFT)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.9	99.8	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
19.7	99.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
17.7	99.7	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
10.6	99.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM138191	genotype D39 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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