Co-expression analysis

Gene ID Ta.23974.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g39710: immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative (HF=2e+0)
Module size 6 genes
NF 0.62
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.96Ta.23974.1.S1_atCA722139--2e+0At4g39710immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.8393.40.96Ta.12420.1.S1_atCA624268--2e-2At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.6786.30.97Ta.10015.3.S1_atCA600988--1e-7At1g80380phosphoribulokinase/uridine kinase-relatedO.I.H.G.S.X.
0.6383.10.97Ta.1160.1.S1_atCD862949--2e+0At3g29000calcium-binding EF hand family proteinO.I.H.G.S.X.
0.5979.80.96Ta.11913.1.A1_atBQ171053--5e+0At5g01881unknown proteinO.I.H.G.S.X.
0.3142.70.97Ta.18169.1.S1_x_atCD880294--1e-7At5g23120HCF136O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.999.8GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
17.299.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
13.699.5GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
13.699.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.099.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.899.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.099.0GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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