Co-expression analysis

Gene ID Ta.23888.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g12500: ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) (HF=6e-1)
Module size 6 genes
NF 0.73
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.99Ta.23888.2.S1_x_atCD909855--6e-1At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.9198.20.98Ta.23888.1.S1_atCD918473--1e+0At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.7389.10.98Ta.9227.1.S1_x_atBJ296643Type 1 non-specific lipid transfer protein precursor-3e-2At5g56150UBC30 (ubiquitin-conjugating enzyme 30)O.I.H.G.S.X.
0.7188.00.97Ta.9227.1.S1_atBJ296643Type 1 non-specific lipid transfer protein precursor-3e-2At5g56150UBC30 (ubiquitin-conjugating enzyme 30)O.I.H.G.S.X.
0.4464.50.99Ta.20518.1.S1_atCD908012--8e+0At4g36430peroxidase, putativeO.I.H.G.S.X.
0.4058.40.99Ta.5873.1.S1_x_atCD910379--5e-1At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.299.9GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
47.499.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
47.199.9GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.999.5GSM315202target strand labeled: Sense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
9.699.1GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.798.9GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.398.8GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.197.5GSM139915Anther pre-meiosis rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.097.4GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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