Co-expression analysis

Gene ID Ta.23807.9.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=2e-87)
Module size 11 genes
NF 0.31
%ile 50.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.98Ta.23807.9.S1_x_atBJ318634--2e-87At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.5273.70.99Ta.2097.2.S1_x_atCA638237--3e-12At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.4666.80.99Ta.6182.1.S1_atCA604745eukaryotic translation initiation factor 3 subunit g-1e-17At3g11400eukaryotic translation initiation factor 3G / eIF3gO.I.H.G.S.X.
0.4362.20.99Ta.2097.1.S1_x_atCA719770--2e-32At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.4058.40.99Ta.2097.3.S1_x_atAL820606--1e-9At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.3549.80.99Ta.28268.1.S1_x_atCA690186--6e-2At5g27700structural constituent of ribosomeO.I.H.G.S.X.
0.2939.20.99Ta.27401.1.S1_x_atBJ30850860s ribosomal protein L21-3e-33At1g0969060S ribosomal protein L21 (RPL21C)O.I.H.G.S.X.
0.2329.00.99Ta.14635.1.S1_a_atAF479048.1ribosomal Pr 117-9e-81At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.2125.50.98Ta.23073.1.S1_atBJ250184--6e-20At1g18080ATARCAO.I.H.G.S.X.
0.2024.00.99Ta.24826.3.S1_x_atBJ263115--8e-34At2g3448060S ribosomal protein L18A (RPL18aB)O.I.H.G.S.X.
0.1618.20.99Ta.30787.1.S1_atBQ802485--6e-38At1g0969060S ribosomal protein L21 (RPL21C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.899.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
8.098.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.692.9GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.592.5GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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