Co-expression analysis

Gene ID Ta.23670.1.S1_at
Gene name transcription factor HBP-1b(c1)
Homology with ArabidopsisSimilar to At1g68640: PAN (PERIANTHIA) (HF=5e-8)
Module size 8 genes
NF 0.23
%ile 39.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9398.70.93Ta.23670.1.S1_atCA705573transcription factor HBP-1b(c1)-5e-8At1g68640PAN (PERIANTHIA)O.I.H.G.S.X.
0.3549.80.98Ta.7563.1.A1_atBJ230359--5e+0At2g18390TTN5 (TITAN 5)O.I.H.G.S.X.
0.2939.20.98Ta.7464.1.S1_atBJ319947--6e-1At3g15080exonuclease family proteinO.I.H.G.S.X.
0.2735.60.98Ta.24666.1.A1_atBQ161217--5e+0At5g11900eukaryotic translation initiation factor SUI1 family proteinO.I.H.G.S.X.
0.2430.30.98Ta.7689.1.A1_atCD910439--5e-1At5g18140DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2125.50.97Ta.7336.2.S1_a_atCA654827--4e+0At1g12244DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinaseO.I.H.G.S.X.
0.1213.30.96Ta.22817.2.S1_s_atBJ319233--5e-2At2g39050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1011.30.93Ta.13163.1.S1_atCD879114--9e-9At4g17260L-lactate dehydrogenase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.599.3GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.897.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.196.4GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM143499Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.096.3GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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