Co-expression analysis

Gene ID	Ta.23203.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g08500: MEKK1 (MAP KINASE KINASE KINASE 1) (HF=5e-5)
Module size	6 genes
NF	0.32
%ile	51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	58.4	0.96	Ta.23203.1.S1_at	CD905906	-	-	5e-5	At4g08500	MEKK1 (MAP KINASE KINASE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.21413.1.S1_at	CD881988	-	-	9e-4	At5g05140	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.96	Ta.21413.1.S1_a_at	CD881988	-	-	9e-4	At5g05140	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.3112.1.S1_at	CD911747	-	-	2e+0	At1g20310	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	TaAffx.129055.1.S1_at	CK161403	Neutral ceramidase	-	2e-11	At5g58980	ceramidase family protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.96	TaAffx.56694.1.S1_at	CA646482	-	-	2e+0	Atcg01060	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	99.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1	94.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.0	94.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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