Co-expression analysis

Gene ID Ta.22981.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g19230: CYP707A1 (HF=1e-6)
Module size 6 genes
NF 0.29
%ile 47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.85Ta.22981.3.S1_a_atBJ291883--1e-6At4g19230CYP707A1O.I.H.G.S.X.
0.3346.90.94Ta.28276.1.S1_a_atBQ162680--5e-1At4g29460phospholipase A2 gamma, secretory low molecular weightO.I.H.G.S.X.
0.2939.20.93Ta.28276.2.S1_atAJ613933--2e+0At4g29460phospholipase A2 gamma, secretory low molecular weightO.I.H.G.S.X.
0.2227.10.89TaAffx.87119.1.S1_x_atBF482631--6e+0At5g58110ATPase activator/ chaperone bindingO.I.H.G.S.X.
0.2125.50.89TaAffx.87119.1.S1_atBF482631--6e+0At5g58110ATPase activator/ chaperone bindingO.I.H.G.S.X.
0.1618.20.93Ta.4189.2.S1_x_atCA626707--3e-1At1g12990glycosyl transferase family 17 proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.399.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.396.7GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.795.8GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.695.6GSM111236genotype F38b developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.595.4GSM143511Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.395.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM138184genotype C25 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.294.8GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage