Co-expression analysis

Gene ID Ta.22587.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g63740: zinc finger protein-related (HF=6e+0)
Module size 26 genes
NF 0.56
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8292.70.96Ta.22587.1.S1_x_atCA705375--6e+0At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.7589.80.97Ta.3916.1.S1_a_atBE213337--5e-1At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.7188.00.98TaAffx.80290.1.S1_atCA713147--8e-2At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.6282.30.98Ta.1988.3.S1_atCK214871--2e-20At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.
0.6282.30.97Ta.28363.1.A1_atBG904047--1e-1At5g64040PSANO.I.H.G.S.X.
0.6282.30.98Ta.3581.1.S1_x_atCA667505--1e-2At1g31330PSAF (photosystem I subunit F)O.I.H.G.S.X.
0.6282.30.98Ta.1971.2.S1_x_atCK215131--4e-1At5g08290YLS8O.I.H.G.S.X.
0.6282.30.98Ta.1988.3.S1_x_atCK214871--2e-20At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.
0.6182.00.97TaAffx.80290.1.S1_x_atCA713147--8e-2At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.5879.20.97Ta.12565.2.S1_atCD873755chloroplast Ptr ToxA-binding protein-1e-11At2g20890PSB29O.I.H.G.S.X.
0.5779.20.97Ta.1135.1.S1_atCD938586--2e-13At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.H.G.S.X.
0.5678.60.97Ta.27751.3.S1_x_atCK211496--4e-10At4g12800PSAL (photosystem I subunit L)O.I.H.G.S.X.
0.5576.80.98Ta.2402.1.S1_atCA722522--7e-12At3g54890LHCA1O.I.H.G.S.X.
0.5475.50.97Ta.28363.1.A1_x_atBG904047--1e-1At5g64040PSANO.I.H.G.S.X.
0.5374.90.97Ta.439.1.S1_atCA632100pre-FBPase protein-6e-23At3g54050fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.5273.70.98Ta.1988.2.S1_x_atCK215613--1e-18At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.
0.5072.40.97Ta.28363.2.S1_atBE217056--1e-4At5g64040PSANO.I.H.G.S.X.
0.4969.70.96Ta.27751.3.S1_atCK211496--4e-10At4g12800PSAL (photosystem I subunit L)O.I.H.G.S.X.
0.4969.70.97Ta.28361.1.S1_x_atCA619696--8e-2At4g01150unknown proteinO.I.H.G.S.X.
0.4969.70.98Ta.30808.1.S1_s_atCK211832--4e-15At3g26650GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT)O.I.H.G.S.X.
0.4969.70.98Ta.1971.1.S1_a_atCA620810--5e-1At5g08290YLS8O.I.H.G.S.X.
0.4869.00.97Ta.85.1.S1_atCK20834823kDa oxygen evolving protein of photosystem II-2e-10At1g06680PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)O.I.H.G.S.X.
0.4767.90.97Ta.1977.1.S1_x_atCK167391--1e+1At5g60590yrdC protein-relatedO.I.H.G.S.X.
0.4565.20.96TaAffx.80290.2.S1_atCA705716--7e-2At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.4464.50.97Ta.136.1.S1_atCA625700thioredoxin M-1e-1At2g47350PAPA-1-like family protein / zinc finger (HIT type) family proteinO.I.H.G.S.X.
0.3956.10.97Ta.1988.1.S1_x_atBG909248--3e-20At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.893.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM298053Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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