Co-expression analysis

Gene ID Ta.22577.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11240: unknown protein (HF=3e-5)
Module size 17 genes
NF 0.29
%ile 47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.97Ta.22577.1.S1_atCA687418--3e-5At1g11240unknown proteinO.I.H.G.S.X.
0.3651.90.98TaAffx.33878.1.S1_atBQ904615--5e-1At1g52790oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3651.90.98Ta.1714.1.A1_atCK171428--3e-2At4g39190unknown proteinO.I.H.G.S.X.
0.3549.80.98Ta.25019.1.S1_atBT009274.1--9e-5At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)O.I.H.G.S.X.
0.3346.90.98Ta.14349.1.S1_x_atCK161301--9e-26At1g4500026S proteasome regulatory complex subunit p42D, putativeO.I.H.G.S.X.
0.3142.70.98Ta.2706.3.S1_atCK205780--2e-15At1g79920ATP bindingO.I.H.G.S.X.
0.3040.90.98Ta.5131.1.S1_atCK171712--8e-2At1g18830transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2939.20.98Ta.14579.1.S1_atBJ21726920S proteasome beta 5 subunit-8e-10At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.2939.20.98Ta.7043.1.A1_atCB307359--2e+0At3g59470far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.
0.2839.20.98Ta.12876.1.S1_a_atCD889769--8e-16At3g19420ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)O.I.H.G.S.X.
0.2839.20.98Ta.29525.1.S1_atCA691279--2e-3At1g79390unknown proteinO.I.H.G.S.X.
0.2735.60.98Ta.4538.1.S1_atCD918714--2e-4At3g20920translocation protein-relatedO.I.H.G.S.X.
0.2430.30.98Ta.6942.1.A1_atCA615822--2e-1At2g46270GBF3 (G-BOX BINDING FACTOR 3)O.I.H.G.S.X.
0.2227.10.98Ta.9581.1.S1_x_atCD920981--2e+0At4g40011unknown proteinO.I.H.G.S.X.
0.1517.10.98Ta.6642.1.S1_a_atBJ272560--1e-18At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.1314.60.97TaAffx.73816.1.S1_atBJ229621--7e+0At5g59310LTP4 (LIPID TRANSFER PROTEIN 4)O.I.H.G.S.X.
0.1011.30.98Ta.18.1.S1_atBJ241578--2e-113At1g54270EIF4A-2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.793.3GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.793.3GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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