Co-expression analysis

Gene ID	Ta.22461.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g17030: ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) (HF=5e+0)
Module size	28 genes
NF	0.39
%ile	62.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	90.1	0.96	Ta.22461.2.S1_at	CK205720	-	-	5e+0	At4g17030	ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.97	Ta.5152.1.A1_s_at	BJ277593	-	-	5e+0	At1g16705	p300/CBP acetyltransferase-related protein-related	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.97	Ta.21919.1.A1_at	CA708737	-	-	4e-4	At3g26850	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.7089.1.S1_at	CD872336	casein kinase-like protein	-	2e-13	At3g13670	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.97	Ta.22731.1.S1_a_at	BJ276668	-	-	9e-9	At5g55510	P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.11208.1.S1_at	BQ169627	-	-	8e+0	At4g39340	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.4729.1.S1_at	BJ273107	-	-	1e-27	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.6555.1.S1_at	CK208136	-	-	1e-12	At5g63610	CDKE	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.97	Ta.128.1.S1_at	U76747.1	Tap	-	5e+0	At5g46730	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.97	Ta.6685.1.S1_at	BQ168372	-	-	7e-2	At4g33210	F-box family protein (FBL15)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.97	Ta.4221.1.S1_at	CD878060	-	-	5e-4	At3g48195	phox (PX) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.98	Ta.28199.2.A1_at	BJ319956	-	-	1e-3	At1g65660	SMP1 (SWELLMAP 1)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.98	Ta.6588.1.A1_at	CK161154	-	-	1e-24	At5g06140	SNX1 (SORTING NEXIN 1)	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.97	TaAffx.9320.1.S1_at	BJ250015	-	-	3e-1	At5g14105	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.547.1.S1_at	AY364467.1	-	-	2e-5	At3g24170	ATGR1 (glutathione-disulfide reductase)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.98	Ta.11728.1.S1_at	BQ170684	-	-	2e-3	At1g10310	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.97	TaAffx.29055.1.S1_x_at	CA651399	-	-	3e+0	At3g33293	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.2514.1.S1_at	BQ162494	-	-	1e+0	At3g47860	apolipoprotein D-related	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.98	Ta.3448.1.S1_at	CK206881	-	-	6e-1	At3g04560	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.14524.1.S1_at	CK193637	-	-	6e-1	At3g26790	FUS3 (FUSCA 3)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.12719.1.S1_at	CA608680	-	-	5e-1	At4g19180	nucleoside phosphatase family protein / GDA1/CD39 family protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.97	Ta.27032.1.S1_at	BT009616.1	-	-	6e-8	At3g09100	mRNA capping enzyme family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.6668.1.A1_at	CA684110	-	-	2e-1	At5g46730	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.97	Ta.6777.1.A1_at	CK168380	-	-	7e-4	At4g30480	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.97	TaAffx.15154.1.S1_s_at	CD883346	-	-	4e-30	At3g21160	mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.97	Ta.14051.1.S1_at	CK195591	-	-	1e-5	At2g38020	VCL1 (VACUOLELESS 1)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.97	Ta.2438.1.S1_at	CD903064	-	-	1e+0	At1g29830	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.6	99.1	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.1	98.5	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
3.8	96.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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