Co-expression analysis

Gene ID	Ta.22398.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g20100: unknown protein (HF=8e+0)
Module size	8 genes
NF	0.40
%ile	63.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	62.2	0.96	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.96	Ta.9006.1.S1_at	BQ162762	-	-	7e+0	At5g15840	CO (CONSTANS)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.11311.1.A1_at	BQ169821	-	-	5e+0	At4g00940	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	TaAffx.12303.1.S1_at	CD938363	-	-	1e-1	At4g37240	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.97	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.96	Ta.27940.1.A1_s_at	BQ169626	-	-	1e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.96	TaAffx.29625.1.S1_at	CA638741	-	-	8e+0	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	99.1	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
9.1	99.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.4	96.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM143497	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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