Co-expression analysis

Gene ID	Ta.21957.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g21185: unknown protein (HF=6e+0)
Module size	6 genes
NF	0.66
%ile	90.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.97	Ta.21957.1.S1_at	CK212193	-	-	6e+0	At2g21185	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.97	Ta.12753.1.S1_at	CD926424	-	-	5e+0	At1g18130	tRNA synthetase-related / tRNA ligase-related	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.14062.1.S1_a_at	CK156520	-	-	1e-1	At1g67840	CSK (CHLOROPLAST SENSOR KINASE)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.14062.2.S1_a_at	BJ218508	-	-	1e+0	At2g30615	-	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.97	Ta.6416.1.S1_at	CK154083	-	-	5e-15	At2g38110	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.28368.2.S1_at	CB307729	Type 1 non specific lipid transfer protein precursor	-	2e+0	At4g22250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.0	89.7	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
1.9	88.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
1.9	88.9	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
1.8	88.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
1.7	87.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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