Co-expression analysis

Gene ID	Ta.2188.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g28020: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.66
%ile	90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.99	Ta.2188.1.S1_x_at	BQ168938	-	-	1e+0	At4g28020	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.98	Ta.2188.2.S1_x_at	CA674658	-	-	4e-1	At1g60987	SCRL5 (SCR-Like 5)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.99	Ta.3309.3.S1_x_at	BE443725	-	-	2e-11	At5g47570	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.98	Ta.2188.3.S1_x_at	CA653492	-	-	2e+1	At5g60430	antiporter/ drug transporter	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.98	Ta.1852.1.S1_at	CA625220	-	-	3e+0	At5g03170	FLA11	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.99	Ta.13823.1.S1_a_at	CK152063	-	-	7e+0	At4g18500	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.5	GSM111216	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.2	97.5	GSM111249	genotype F87 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM111248	genotype F87 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1	94.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM111175	genotype G30 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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