Co-expression analysis

Gene ID	Ta.2176.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g26300: emb1027 (embryo defective 1027) (HF=1e-25)
Module size	6 genes
NF	0.44
%ile	68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.97	Ta.2176.1.S1_at	CK206562	-	-	1e-25	At4g26300	emb1027 (embryo defective 1027)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	TaAffx.95068.1.S1_at	BJ231602	-	-	2e+1	At5g58005	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.3155.1.S1_at	CK169154	-	-	2e+0	At5g27390	-	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.21411.1.S1_at	CK205494	-	-	8e-9	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.6268.1.A1_at	BJ306810	-	-	8e-2	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.98	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.9	99.5	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
14.8	99.5	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
8.7	98.9	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.4	96.8	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.9	96.1	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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