Co-expression analysis

Gene ID Ta.21682.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g03040: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.02
%ile 6.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.75Ta.21682.1.S1_atCA698261--3e+0At4g03040unknown proteinO.I.H.G.S.X.
0.045.80.93TaAffx.119496.1.S1_atBJ270328--9e-1At5g40490RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.045.80.90Ta.30569.1.S1_a_atCA638514--3e-1At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)O.I.H.G.S.X.
0.012.40.90TaAffx.24685.1.S1_x_atCA714323--3e+0At2g36080DNA-binding protein, putativeO.I.H.G.S.X.
0.012.40.90TaAffx.9034.1.S1_atCA615483--1e+0At1g23850unknown proteinO.I.H.G.S.X.
0.012.40.92TaAffx.110263.1.S1_atCA661150--1e+0At2g28740HIS4O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.499.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
8.898.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.398.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.798.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.695.6GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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