Co-expression analysis

Gene ID	Ta.21388.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g64810: WRKY51 (HF=1e+1)
Module size	11 genes
NF	0.89
%ile	99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.85	Ta.21388.1.S1_at	CA675057	-	-	1e+1	At5g64810	WRKY51	O.I.	H.G.	S.X.	Please select
0.95	99.1	0.87	TaAffx.107391.1.S1_at	CA700505	-	-	1e+0	At3g57390	AGL18	O.I.	H.G.	S.X.	Please select
0.95	99.1	0.91	Ta.10688.1.S1_at	AB094060.1	indole synthase	-	3e-3	At4g02610	tryptophan synthase, alpha subunit, putative	O.I.	H.G.	S.X.	Please select
0.95	99.1	0.92	Ta.3380.1.S1_at	AB042629.1	-	-	2e-2	At2g36026	-	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.86	TaAffx.99036.1.A1_at	CK211911	-	-	5e+0	At1g23040	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.89	Ta.1362.1.S1_at	AB042631.1	-	-	1e-2	At5g25130	CYP71B12	O.I.	H.G.	S.X.	Please select
0.87	94.2	0.89	Ta.3381.1.S1_at	AF123602.1	-	-	9e-1	At4g31940	CYP82C4	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.90	Ta.23822.1.S1_at	AF123603.1	-	-	6e-2	At2g36026	-	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.90	Ta.3382.1.S1_at	AB042627.1	-	-	4e+0	At3g21460	electron carrier/ protein disulfide oxidoreductase	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.88	Ta.23042.1.S1_x_at	BE517350	-	-	1e-2	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.91	Ta.23042.2.S1_at	CK214164	-	-	5e+0	At4g26230	60S ribosomal protein L31 (RPL31B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.7	99.9	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
27.9	99.8	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
17.7	99.7	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
15.9	99.6	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
14.5	99.5	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
14.2	99.5	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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