Co-expression analysis

Gene ID	Ta.21345.1.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g26330: plastocyanin-like domain-containing protein / mavicyanin, putative (HF=2e+1)
Module size	19 genes
NF	0.77
%ile	95.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.81	92.4	0.87	Ta.21345.1.A1_x_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	O.I.	H.G.	S.X.	Please select
0.94	98.9	0.90	Ta.245.1.S1_at	AF207546.1	cold-responsive protein COR14b	-	1e+0	At2g43120	pirin, putative	O.I.	H.G.	S.X.	Please select
0.92	98.5	0.87	Ta.13650.1.A1_at	CK211830	-	-	9e-2	At5g49120	senescence-associated protein-related	O.I.	H.G.	S.X.	Please select
0.88	94.4	0.88	Ta.1165.1.A1_at	AF207545.1	WCOR14a	-	2e+0	At3g06590	transcription factor	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.87	TaAffx.97767.1.A1_at	CA721990	-	-	4e+0	At3g19508	unknown protein	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.87	Ta.3189.1.S1_x_at	CK152358	-	-	7e+0	At2g20740	-	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.87	Ta.1138.1.S1_at	AF255053.1	Cold-responsive LEA/RAB-related COR protein	-	7e+0	At2g35470	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.87	Ta.28273.1.S1_x_at	BQ483998	-	-	4e+0	At3g24070	zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select
0.79	91.3	0.91	Ta.8097.1.A1_at	BG908758	-	-	4e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.90	Ta.20697.1.S1_at	CA676790	-	-	1e+0	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.87	Ta.7830.1.S1_at	AJ613758	-	-	2e+1	At5g25560	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.86	Ta.613.1.S1_at	CK214449	-	-	2e+0	At1g33140	PGY2 (PIGGYBACK2)	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.88	TaAffx.9441.1.S1_at	CA598694	-	-	9e-1	At1g33140	PGY2 (PIGGYBACK2)	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.86	Ta.21345.1.A1_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.87	TaAffx.54307.1.S1_x_at	CA683205	-	-	3e+0	At1g30620	MUR4 (MURUS 4)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.86	Ta.14681.1.S1_at	CA679812	-	-	2e-1	At3g45160	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.87	Ta.28369.1.S1_at	CA727825	-	-	4e+0	At3g24070	zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.88	Ta.1967.1.S1_x_at	CK152466	-	-	1e+0	At5g18600	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.87	Ta.1967.2.A1_x_at	AJ614579	-	-	9e-1	At5g18600	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.5	99.1	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.6	98.7	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.3	98.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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