Co-expression analysis

Gene ID Ta.2127.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g11170: ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (HF=6e-33)
Module size 8 genes
NF 0.54
%ile 80.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.95Ta.2127.3.S1_a_atCA731487--6e-33At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.H.G.S.X.
0.6786.30.96TaAffx.51698.1.S1_s_atCA720381core3ft protein-4e+0At4g33480unknown proteinO.I.H.G.S.X.
0.5779.20.97Ta.3075.2.S1_x_atCA601469--4e-14At3g04600tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.5072.40.96Ta.3075.3.S1_a_atCA608966--1e-3At3g04600tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.5072.40.96TaAffx.81113.1.S1_s_atCA689395--4e+0At5g54190PORAO.I.H.G.S.X.
0.4464.50.96Ta.1178.2.S1_atBG909050--1e-1At2g07775unknown proteinO.I.H.G.S.X.
0.4362.20.96TaAffx.115985.2.S1_s_atBQ606839--6e-2At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.3549.80.96TaAffx.123475.1.S1_atCF133706--3e-6At2g16950TRN1 (TRANSPORTIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.0GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.296.6GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.595.4GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM298084Crown tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.994.0GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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