Co-expression analysis

Gene ID Ta.21200.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g19100: calcium-dependent protein kinase, putative / CDPK, putative (HF=2e-4)
Module size 11 genes
NF 0.53
%ile 79.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.96Ta.21200.1.S1_x_atBT009309.1--2e-4At3g19100calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.8092.20.97Ta.9740.1.A1_atBU607153--2e-12At3g48380-O.I.H.G.S.X.
0.5779.20.97Ta.7265.2.A1_atBJ301953--4e+0At5g62200embryo-specific protein-relatedO.I.H.G.S.X.
0.5779.20.98Ta.2282.1.S1_a_atCA602264--2e-14At1g20760calcium-binding EF hand family proteinO.I.H.G.S.X.
0.5678.60.98Ta.6725.1.S1_atCK208802--3e+0Atmg00980-O.I.H.G.S.X.
0.5072.40.98Ta.386.1.S1_atBF473976--6e-6At2g45500ATP binding / nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.4767.90.98Ta.26089.1.A1_atBQ237184--1e+0At5g08480VQ motif-containing proteinO.I.H.G.S.X.
0.4666.80.97Ta.22989.1.S1_x_atCA721956--2e-27At5g58030transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.4666.80.98Ta.7525.1.A1_s_atCK155396--3e-2At5g49570AtPNG1 (Arabidopsis thaliana peptide-N-glycanase 1)O.I.H.G.S.X.
0.4058.40.97Ta.8133.1.S1_atCA655541--2e-1At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.3244.40.97TaAffx.50744.1.S1_atCA735974--2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.3GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.196.4GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.996.1GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.795.8GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.595.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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