Co-expression analysis

Gene ID Ta.21119.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g63000: NPL41 (NPL4-LIKE PROTEIN 1) (HF=3e-3)
Module size 6 genes
NF 0.53
%ile 79.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.80.98Ta.21119.1.S1_a_atCD915118--3e-3At3g63000NPL41 (NPL4-LIKE PROTEIN 1)O.I.H.G.S.X.
0.9198.20.98Ta.608.1.S1_x_atBJ319046--2e-8At5g09920NRPB4O.I.H.G.S.X.
0.7790.80.98Ta.608.1.S1_atBJ319046--2e-8At5g09920NRPB4O.I.H.G.S.X.
0.6786.30.98Ta.30622.1.S1_x_atAY316293.1SKP1/ASK1-like protein-2e-16At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.5072.40.98Ta.1096.2.S1_x_atCA601240--2e-2At1g27350-O.I.H.G.S.X.
0.2633.60.98Ta.562.3.A1_x_atAJ609777--1e-1At5g05987PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.294.8GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM143498Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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