Co-expression analysis

Gene ID Ta.21086.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At2g20930: - (HF=3e-16)
Module size 30 genes
NF 0.37
%ile 59.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8292.70.97Ta.21086.2.S1_x_atBJ307886--3e-16At2g20930-O.I.H.G.S.X.
0.5374.90.98Ta.1053.2.S1_x_atCA686041--1e-4At1g65930isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.5374.90.98Ta.3887.3.A1_s_atBJ248686--2e-2At1g53780ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl cis-trans isomeraseO.I.H.G.S.X.
0.4969.70.98Ta.822.2.S1_x_atCD901100--1e-90At4g40040histone H3.2O.I.H.G.S.X.
0.4869.00.98Ta.4770.1.S1_x_atCK162188--4e-1At2g28105-O.I.H.G.S.X.
0.4464.50.98Ta.4980.1.S1_atCK213203--9e+0At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)O.I.H.G.S.X.
0.4464.50.98Ta.8146.1.S1_atBJ320719--6e-30At2g47470UNE5 (UNFERTILIZED EMBRYO SAC 5)O.I.H.G.S.X.
0.4362.20.98Ta.9607.1.A1_a_atCA708572--5e+0At5g2451060s acidic ribosomal protein P1, putativeO.I.H.G.S.X.
0.4362.20.98Ta.6402.1.S1_atCK151576--2e-1At3g45280SYP72 (SYNTAXIN OF PLANTS 72)O.I.H.G.S.X.
0.4260.90.98Ta.22845.1.S1_atBJ215922tat binding protein-7e-54At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)O.I.H.G.S.X.
0.4260.90.98Ta.1398.1.S1_a_atBQ802527--2e-33At4g27690VPS26B (VACUOLAR PROTEIN SORTING 26B)O.I.H.G.S.X.
0.4260.90.98Ta.28553.8.S1_x_atBJ217307ubiquitin-6e-106At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.4260.90.98Ta.7485.1.S1_atCK211619--3e-9At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.3956.10.98Ta.8151.1.S1_atBQ804186--3e+0Atmg00890-O.I.H.G.S.X.
0.3956.10.98Ta.1087.1.S1_s_atCK169309--3e-5At3g25220FKBP15-1O.I.H.G.S.X.
0.3854.70.98Ta.28742.4.S1_x_atBJ286746--1e-82At2g36530LOS2O.I.H.G.S.X.
0.3854.70.98Ta.6924.1.S1_atBQ744409--8e-1At2g4761060S ribosomal protein L7A (RPL7aA)O.I.H.G.S.X.
0.3753.00.97Ta.3495.1.S1_a_atBQ166285--1e+1At5g11500unknown proteinO.I.H.G.S.X.
0.3651.90.98Ta.13180.2.S1_x_atBJ263702--2e-5At5g20165unknown proteinO.I.H.G.S.X.
0.3549.80.98Ta.21374.2.S1_atCK208435--8e-66At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)O.I.H.G.S.X.
0.3549.80.98Ta.23008.1.S1_atBJ262674--1e-2At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)O.I.H.G.S.X.
0.3448.10.98Ta.28742.2.S1_x_atBJ217937--2e-144At2g36530LOS2O.I.H.G.S.X.
0.3040.90.98Ta.6566.1.S1_atCD914098--3e-71At2g2014026S protease regulatory complex subunit 4, putativeO.I.H.G.S.X.
0.2939.20.98Ta.1714.1.A1_atCK171428--3e-2At4g39190unknown proteinO.I.H.G.S.X.
0.2939.20.97Ta.1096.2.S1_x_atCA601240--2e-2At1g27350-O.I.H.G.S.X.
0.2839.20.98Ta.2291.1.S1_x_atCK215947ADP-ribosylation factor-3e-111At1g70490ARFA1DO.I.H.G.S.X.
0.2532.10.98Ta.2207.1.S1_atCK200975--2e-56At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.
0.2430.30.98Ta.25017.1.S1_atCD901339--4e-21At5g16050GRF5 (GENERAL REGULATORY FACTOR 5)O.I.H.G.S.X.
0.2227.10.98Ta.2502.2.A1_x_atCD865828HSP80-2-3e-57At5g56010HSP81-3O.I.H.G.S.X.
0.2227.10.98Ta.18.1.S1_atBJ241578--2e-113At1g54270EIF4A-2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.7GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.893.6GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.692.9GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.391.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.291.0GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.291.0GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.190.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.190.3GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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