Co-expression analysis

Gene ID	Ta.20999.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g74090: SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18) (HF=4e-2)
Module size	6 genes
NF	0.60
%ile	86.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.90	Ta.20999.1.S1_at	CA639964	-	-	4e-2	At1g74090	SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.92	Ta.14482.1.S1_at	BJ214882	-	-	2e-16	At1g10200	WLIM1	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.92	TaAffx.98159.1.S1_at	BG607574	-	-	9e+0	At5g65670	IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.92	Ta.18709.1.S1_at	CA641061	-	-	3e-12	At4g03110	RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.93	Ta.5554.1.S1_at	BJ285326	-	-	3e-3	At1g77020	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.93	Ta.25454.1.S1_at	CA638730	-	-	6e-4	At3g58120	BZIP61	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.1	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
17.0	99.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
14.8	99.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.9	99.4	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.6	98.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5	98.6	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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