Co-expression analysis

Gene ID Ta.20790.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g27080: TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3) (HF=3e-1)
Module size 10 genes
NF 0.30
%ile 49.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.87Ta.20790.2.S1_atCA620153--3e-1At3g27080TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)O.I.H.G.S.X.
0.4362.20.95TaAffx.34241.2.S1_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.4260.90.95Ta.3478.3.S1_x_atCA637826--2e-11At1g69670CUL3B (CULLIN 3B)O.I.H.G.S.X.
0.4159.60.95TaAffx.25126.1.S1_atCA705922--3e+0At3g17460PHD finger family proteinO.I.H.G.S.X.
0.3346.90.93TaAffx.25064.1.S1_atCA707165--2e+0At2g19290unknown proteinO.I.H.G.S.X.
0.3346.90.94TaAffx.34241.2.S1_x_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.3040.90.94Ta.14479.3.S1_x_atCA630294--7e-18At2g05830eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.2939.20.95TaAffx.25411.1.S1_atCA700489--4e+0At4g35320unknown proteinO.I.H.G.S.X.
0.1922.40.92Ta.28579.2.S1_atCA611367--4e+0At5g67580TRB2O.I.H.G.S.X.
0.078.60.95TaAffx.112158.1.S1_atCA626538--2e+1At3g28590unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.899.5GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.899.4GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.098.8GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.798.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.797.1GSM324492Si+ B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.096.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM324484Si- B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.793.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.592.5GSM138137Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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