Co-expression analysis

Gene ID	Ta.2076.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g78630: emb1473 (embryo defective 1473) (HF=2e-7)
Module size	12 genes
NF	0.75
%ile	95.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	90.1	0.96	Ta.2076.1.S1_at	CK215984	-	-	2e-7	At1g78630	emb1473 (embryo defective 1473)	O.I.	H.G.	S.X.	Please select
0.88	94.4	0.97	Ta.1452.1.S1_at	CA601014	-	-	4e-4	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.87	94.2	0.98	Ta.621.2.S1_x_at	CK211230	-	-	8e+0	At1g74970	RPS9 (RIBOSOMAL PROTEIN S9)	O.I.	H.G.	S.X.	Please select
0.79	91.3	0.96	Ta.28888.1.S1_at	CA617384	-	-	4e-5	At5g13510	ribosomal protein L10 family protein	O.I.	H.G.	S.X.	Please select
0.79	91.3	0.97	Ta.3100.2.S1_x_at	CA619410	-	-	1e-3	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.97	Ta.1381.2.S1_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.96	Ta.28558.1.S1_at	CA680546	-	-	5e+0	At1g07645	ATDSI-1VOC (DESSICATION-INDUCED 1VOC SUPERFAMILY PROTEIN)	O.I.	H.G.	S.X.	Please select
0.69	86.9	0.98	Ta.3100.1.S1_x_at	CK196277	-	-	1e-1	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.1381.2.S1_x_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.96	TaAffx.123175.1.S1_at	CA624478	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.97	Ta.1452.1.S1_x_at	CA601014	-	-	4e-4	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.3100.2.S1_at	CA619410	-	-	1e-3	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.6	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.8	98.4	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.7	98.4	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.7	98.4	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.6	98.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.3	98.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.2	97.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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