Co-expression analysis

Gene ID	Ta.20537.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At3g53340: NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) (HF=5e-4)
Module size	23 genes
NF	0.19
%ile	33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.5	0.94	Ta.20537.1.S1_x_at	CA648311	-	-	5e-4	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.97	Ta.7146.1.S1_at	BJ321579	-	-	3e+0	At5g62100	ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.95	Ta.3207.2.S1_a_at	CD889824	-	-	4e-5	At5g08080	SYP132 (SYNTAXIN OF PLANTS 132)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.95	Ta.7690.1.S1_at	BJ282564	-	-	1e+0	At1g09380	integral membrane family protein / nodulin MtN21-related	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.98	Ta.2880.1.S1_at	CA709110	Zinc-finger motif	-	7e-10	At4g22140	DNA binding / protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.96	Ta.3771.1.S1_at	BQ804584	-	-	6e-1	At5g48680	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.96	TaAffx.130819.1.A1_at	BG607589	-	-	4e-9	At3g02290	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.96	Ta.7620.1.A1_at	BJ321853	-	-	5e+0	At1g53543	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.96	Ta.19423.1.S1_a_at	CD934753	-	-	2e-36	At5g54960	PDC2 (pyruvate decarboxylase-2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.97	Ta.4305.1.S1_at	CD897967	-	-	7e+0	At5g48660	-	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.96	Ta.22335.2.S1_at	BJ252263	-	-	7e-2	At5g67120	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	Ta.20537.2.S1_at	BJ239908	-	-	3e-1	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.96	Ta.4803.1.S1_s_at	BJ251798	-	-	3e+0	At3g24590	PLSP1 (plastidic type I signal peptidase 1)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.97	TaAffx.65400.1.S1_at	BJ253941	-	-	2e+0	At4g29460	phospholipase A2 gamma, secretory low molecular weight	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.97	Ta.2231.1.S1_at	CF133342	-	-	7e-2	At3g02830	ZFN1 (ZINC FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.9622.1.S1_x_at	CK152265	DEAD-box ATPase-RNA-helicase	-	3e-10	At3g01540	DRH1 (DEAD BOX RNA HELICASE 1)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.96	Ta.24303.1.A1_at	CD454649	-	-	5e-1	At1g29110	cysteine proteinase, putative	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.96	Ta.30549.1.A1_at	CK208262	-	-	2e+1	At5g44582	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	Ta.10371.2.A1_at	BJ250988	-	-	1e+0	At4g18070	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.98	Ta.3003.1.S1_s_at	BE398996	-	-	3e-44	At5g26751	ATSK11	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.96	Ta.8994.1.S1_at	CK196380	-	-	2e+0	At4g36791	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.97	TaAffx.91607.1.A1_at	BJ310971	-	-	7e-2	At4g24370	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.97	Ta.6169.1.S1_at	BJ272139	-	-	8e-4	At3g11200	AL2 (ALFIN-LIKE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.4	96.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.4	95.2	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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