Co-expression analysis

Gene ID Ta.20317.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g59850: 40S ribosomal protein S15A (RPS15aF) (HF=4e+0)
Module size 9 genes
NF 0.21
%ile 35.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.94Ta.20317.1.S1_x_atCA678146--4e+0At5g5985040S ribosomal protein S15A (RPS15aF)O.I.H.G.S.X.
0.4464.50.94TaAffx.121291.1.S1_atBG905480--3e+0At2g10340unknown proteinO.I.H.G.S.X.
0.4464.50.95Ta.6666.2.S1_a_atCA640317--5e-12At3g49420Got1-like family proteinO.I.H.G.S.X.
0.2532.10.96Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.2430.30.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.2125.50.95TaAffx.131315.1.S1_atBJ278064--2e-5At4g09810transporter-relatedO.I.H.G.S.X.
0.2024.00.95Ta.4119.1.S1_atBJ264170--4e+0At3g04945LCR18 (Low-molecular-weight cysteine-rich 18)O.I.H.G.S.X.
0.1517.10.95TaAffx.31313.1.S1_atCA617546--1e+1At3g52561unknown proteinO.I.H.G.S.X.
0.078.60.95Ta.8613.1.A1_atBQ162128--1e+0At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.799.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.698.9GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.998.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage