Co-expression analysis

Gene ID Ta.20284.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g39950: ATTRX2 (THIOREDOXIN 2) (HF=3e-1)
Module size 6 genes
NF 0.34
%ile 55.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.60.88Ta.20284.1.S1_atCA677396--3e-1At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.6081.00.88Ta.178.2.S1_x_atAB038394.1cysteine proteinase inhibitor-3e-1At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.4464.50.89Ta.19160.1.S1_atCA648093--7e-3At1g75550glycine-rich proteinO.I.H.G.S.X.
0.4058.40.90TaAffx.83362.1.S1_atCA658370--4e+0At3g23171unknown proteinO.I.H.G.S.X.
0.2024.00.89TaAffx.113871.2.S1_atCA660307--9e-1At2g28760NAD-dependent epimerase/dehydratase family proteinO.I.H.G.S.X.
0.1314.60.89TaAffx.31447.1.S1_atCA616189--3e-1At5g38400unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.899.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
14.599.5GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.398.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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