Co-expression analysis

Gene ID	Ta.20175.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g55430: unknown protein (HF=1e+0)
Module size	7 genes
NF	0.05
%ile	13.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.83	Ta.20175.2.S1_at	CA677975	-	-	1e+0	At5g55430	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.88	TaAffx.109232.2.S1_at	CA678235	-	-	2e-1	At3g55460	SCL30	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.91	Ta.23362.3.S1_x_at	BQ788926	-	-	2e+0	At5g61130	PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.89	TaAffx.15937.1.S1_at	BQ802096	-	-	6e+0	At3g22183	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.89	Ta.29349.1.S1_x_at	CK155644	-	-	5e-2	At4g32610	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.87	TaAffx.76510.1.S1_at	CA679243	-	-	1e+0	At5g46990	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.88	TaAffx.130174.1.A1_at	CK163909	-	-	2e+0	At2g41180	sigA-binding protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.7	98.4	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9	97.3	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7	97.1	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7	97.1	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.6	97.0	GSM143516	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.6	97.0	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.5	96.9	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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